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UNCHealthyBrainMRI-Inputs
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MRI scans of healthy individuals

2006 MICCAI Open Workshop Announcement
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The Insight Software Consortium (ISC) and The National Aliance for Medical Image Computing (NA-MIC) are hosting a one-day MICCAI workshop that will feature oral and poster presentations on open-source toolkits and applications as well as freely available [...]

A DICOM-based Software Infrastructure for Data Archiving
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In this paper , we propose an extension to the National Library of Medicine's Insight Segmentation and Registration Toolkit (ITK. www.itk.org) with a companion image access and archival system that merges the image transfer capabilities of DICOM with DSpace [...]

MICCAI 2005 Open-Source Workshop Announcement
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The Insight Software Consortium (ISC) and The National Aliance for Medical Image Computing (NA-MIC) are hosting a one-day MICCAI workshop with peer-reviewed papers that will feature oral and poster presentations on open-source toolkits and applications [...]

UNCHealthyBrainMRI-RView
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BSpline registration results from an application developed by Torsten Rohlfing that is based, in part, on the RView application from Dr. Colin Studholme, Daniel Rueckert, and Julia Schnabel.

Using TubeTK to Automatically Merge Volumes
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This article describes implementation of a CLI module to merge an image into the space of another adjacent image using the Insight Toolkit. The algorithm constructs a smoothly stitched image out of two or more smaller images. The overlapping regions of the [...]

Implementation of local structure tensor and enhancement anisotropic diffusion filters in ITK
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This paper describes implementation of local structure tensor and anisotropic enhancement diffusion filters using the Insight Toolkit. The anisotropic diffusion filters are implemented using ITK's finite difference solver framework. The filters are used to [...]

Open Source and Open Data for MICCAI - Announcement and Program
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This workshop features peer-reviewed submissions that describe the available data and software of MICCAI.

Helper class for initializing the grid parameters of a BSpline deformable transform by using an image as reference
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This document describes a simple helper class intended for making easy to initialize the grid parameters of a BSplineDeformableTranform. This paper is accompanied with the source code, input data, parameters and output data that we used for validating the [...]

ITK in Biomedical Research and Commercial Applications
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The Insight Segmentation and Registration Toolkit (www.itk.org) has become a standard in academia and industry for medical image analysis. In recent years, the ITK developers' community has focused on providing programming interfaces to ITK from Python, Java, [...]

Vessel Enhancing Diffusion Filter
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This paper describes vessel enhancing diffusion (VED) filters implemented using the Insight Toolkit (ITK). The filters are implementation of the VED algorithm developed by Manniesing et al . The VED algorithm follows a multiscale approach to enhance [...]

Optimizing ITK’s Registration Methods for Multi-processor, Shared-Memory Systems
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This document describes work-in-progress for refactoring ITK’s registration methods to exploit the parallel, computation power of multi-processor, shared-memory systems. Refactoring includes making the methods multi-threaded as well as optimizing the [...]

UNCHealthyBrainMRI-RegisterImagesModule
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UNCHealthBrainMRI registration test results from the RegisterImagesModule that is distributed with Slicer and via KWPublic.

ITK Tutorial Presentation Slides
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This course introduces attendees to select open-source efforts in the field of medical image analysis. Opportunities for users and developers are presented. The course particularly focuses on the open-source Insight Toolkit (ITK) for medical image [...]

IGSTK: Development Process and Project Management Best Practices for an Open Source Software Toolkit for Image-Guided Surgery Applications
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Open source technologies are increasing in popularity for software development. Many open source projects rely on skilled development teams whose members are distributed throughout the world. Often, agile development methods are employed by these teams, as [...]

IGSTK: A State Machine Architecture for an Open Source Software Toolkit for Image-Guided Surgery Applications
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The Image-Guided Surgery Toolkit (IGSTK) is an Open Source software project being developed under NIH/NIBIB funding. The toolkit will provide a common platform for implementing image-guided surgery applications and for fostering research in the field. The [...]


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ISSN 2327-770X
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