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level set segmentation using coupled active surfaces
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An Insight Toolkit (ITK) processing framework for simultaneous segmentation of multiple objects using active contours without edges is presented in this paper. These techniques are also popularly referred to as multiphase methods. Earlier, we had an [...]

Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes
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An Insight Toolkit (ITK) processing framework for segmenting and tracking nuclei in time-lapse microscopy images using coupled active contours is presented in this paper. We implement the method of Dufour et al.[2] to segment and track cells in fluorescence [...]

Level Set Segmentation: Active Contours without edge
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An Insight Toolkit (ITK) processing framework for segmentation using active contours without edges is presented in this paper. Our algorithm is based on the work of Chan and Vese [1] that uses level- sets to accomplish region segmentation in images with [...]

Reproducible Research Training at Scipy 2014
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This article illustrates the process of performing reproducible research with existing open source tools.

MR Parameter Map Suite: ITK Classes for Calculating Magnetic Resonance T2 and T1 Parameter Maps
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This document describes a suite of new multi-threaded classes for calculating magnetic resonance (MR) T2 and T1 parameter maps implemented using the Insight Toolkit ITK (www.itk.org). Similar to MR diffusion tensor imaging (DTI), MR T2 and T1 parameter maps [...]

InsightToolkit Kinetic Analysis (itk::ka) Library
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This paper describes how to compile and use the Insight Toolkit Kinetic Analysis library (itk::ka), to perform analysis of dynamic medical images, along with a brief overview of the library source code. Supplied, are a set of interfaces to facilitate [...]


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ISSN 2327-770X
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