STL file format MeshIO class for ITK
No opinion
This document describes the implementation of an ITK class to support the reading and writing of Meshes in STL file format. The Meshes are assumed to contain 2D manifolds embedded in a 3D space. In practice, it would be desirable to use this class mostly to [...]

Transforming an itkPointSet
This document presents a set of classes to enable operations on itkPointSet objects. In particular, itkTransformPointSetFilter allows a transformation to be applied to a set of points. We propose these classes as addition to the Insight Toolkit ITK.

Cubic and Hermite splines for VTK
No opinion
A cubic spline is a spline where each curve is defined by a third-order polynomial, while a Hermite spline has each polynomial specified in Hermite form, being computed using tangent information as well as the position of the points. We propose two new [...]

VascuSynth: Vascular Tree Synthesis Software
In previous work, we presented an algorithm to synthesize volumetric images of vascular trees and generate the corresponding ground truth segmentations, bifurcation locations, branch properties, and tree hierarchy. In this work, we provide the software needed [...]

A Lightweight and Portable Communication Framework for Multimodal Image-Guided Therapy
No opinion
In today’s medicine a lot of research revolves around the combination of different imaging and tracking modalities to form a new system for Image-Guided Therapy. Such systems can help to overcome shortcomings of the individual techniques or create new kinds [...]

Reader/Writer for Analyze Object Maps for ITK
This document describes an addition to the Image IO Library of the Insight Toolkit (ITK). ITK has been able to read in Analyze image files but not the Analyze Object Maps that correspond to the images. Analyze Object maps define regions of interest that are [...]

Steps towards the Integration of Model Guided Therapy Systems into the Healthcare Environment
No opinion
Hospital Information Systems (HIS) are the primary source of information in clinical routine. In most clinics and medical centers, an electronic health record (EHR) stores relevant patient information which is passed between sub-systems using the ISO standard [...]

Importing Contours from DICOM-RT Structure Sets
This paper presents parsing software for importing contours from DICOM RT structure set files into binary image files. This is a common requirement for transferring expert manual segmentations from radiotherapy treatment planning software into external image [...]

Importing Contours from DICOM-RT Structure Sets with ITK4
This paper presents code for reading contours from DICOM RT structure set files into binary labels. This is a common requirement for transferring expert manual segmentations from radiotherapy treatment planning software into external image analysis [...]

DICOM Spatial Transform IO in the Insight Toolkit
No opinion
This document describes a module that extends the Insight Toolkit, ITK, which reads DICOM Spatial Rogistration Object files in itk::Transform's. Currently, DICOM files are read by applying the DCMTK library as a backend. An itk::DCMTKTransformIO class can be [...]

Label object representation and manipulation with ITK
Richard Beare has recently introduced a new filter to efficiently labelize the connected components with ITK, and has also proposed to use the run-length encoding used in that filter to implement some of the most useful binary mathematical morphology [...]

Multidimensional Arrays and the nArray Package
At the Johns Hopkins University’s Engineering Research Center for Computer-Integrated Surgical Systems and Technology (ERC-CISST) laboratory, we have designed and developed a platformindependent C++ software package, called the nArray library, that provides [...]

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