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Dose Painting with a Variable Collimator for the Small Animal Radiation Research Platform (SARRP)
Published in The MIDAS Journal
Published in The MIDAS Journal
The goal of radiation treatment is to irradiate cancer cells (i.e., a target region) without destroying adjacent healthy tissue. Thus, it is advantageous to form the beam so that it best approximates the target, thereby reducing the amount of dose absorbed in [...]

It is often useful to be able to compute the component of image gradient in a direction defined by a shape of some form, rather than relative to the image axis. This article introduces a simple method for doing this based on distance transforms that is [...]

This document presents an implementation of Moore Neighbor Tracing - an algorithm to find an ordered outline of a blob or contour in an image.
An excellent tutorial on Moore Neighbor Tracing is provided [...]

Automatic Conductance Estimation Methods for Anisotropic Diffusion ITK Filters
Published in The Insight Journal
Published in The Insight Journal
The anisotropic diffusion algorithm has been intensively studied in the past decades, which could be considered as a very efficient image denoising procedure in many biomedical applications. Several authors contributed many clever solutions for diffusion [...]

This document describes an implementation of an alternative bilateral filtering algorithm in ITK.
This class implements the fast bilateral filter algorithm in ITK by taking the input image and organizing it into the required data structure as an ITK Image [...]

We have implemented filters for computing phase symmetry (PS) in ITK using steerable filters computed and applied in the Fourier domain. In some recent publications, phase symmetry has been shown to be a useful pre-processing measure for performing image [...]

Facet Analyser: ParaView plugin for automated facet detection and measurement of interplanar angles of tomographic objects
Published in The MIDAS Journal
Published in The MIDAS Journal
The presented ParaView plugin allows easy access to the algorithm described in Ref 1. It enables analysis of faceted objects that exhibit distortions in their digital representation, e.g. due to tomographic reconstruction artifacts.
The contributed [...]

An entropy based multi-thresholding method for semi-automatic segmentation of liver tumors
Published in The MIDAS Journal
Published in The MIDAS Journal
Liver cancer is the fifth most commonly diagnosed cancer and the third most common cause of death
from cancer worldwide. A precise analysis of the lesions would help in the staging of the tumor and
in the evaluation of the possible applicable therapies. In [...]
