The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews


info The MICCAI'08 workshops have been moved to the Midas Journal.
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Class for Serial Transformations
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Rohlfing T.
This paper describes a simple class for serial transformations, i.e., the concatenation of other transformations. This can be used for doxygen{ResampleImageFilter}.

Some extra image logical operations
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Beare R.
Logic operations such as $I > J$, where I and J are images are useful when generating masks. This submission includes $==$, $>$, $>=$, $<$ and $<=$ filters based on the existing logic filters. This is a very minor submission - there may already be easy [...]

How to use ITK and MFC
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Su Y.
The object of this application is to illustrate the use of ITK with MFC

Gridding Graphic Graticules
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Tustison N., Avants B., Gee J.
Certain classes of images find disparate use amongst members of the ITK community for such purposes as visualization, simulation, testing, etc. Currently there exists two derived classes from the ImageSource class used for generating specific images for [...]

I-DO: A Deformable Organisms framework for ITK
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McIntosh C., Hamarneh G.
Medical image analysis is an important problem relating to the study of various diseases. Since their inception to MICCAI in 2001, ''deformable organisms'' have emerged as a fruitful methodology with examples ranging from 2D corpus callosum segmentation [...]

Medical Image Analysis with VTK: A Tutorial
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Papademetris X.
This paper describes a new tutorial book titled "An Introduction to Programming for Medical Image Analysis with the Visualization Toolkit." This book derived from a set of class handouts used in a biomedical engineering graduate seminar at Yale University. [...]

ITK Neural Networks IO Classes
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Venkatram R.
Classes to provide IO capabilities for the ITK Neural Networks library.

User-Guided Level Set Segmentation of Anatomical Structures with ITK-SNAP
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Yushkevich P.A., Piven J., Cody H., Ho S., Gee J.C., Gerig G.
Active contour segmentation and its robust implementation using level sets have been studied thoroughly in the medical image analysis literature. Despite the availability of these powerful methods, clinical research still largely relies on manual [...]

Model-Image Registration of Parametric Shape Models: Fitting a Shell to the Cochlea
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Baker G., Barnes N.
Mathematical models are often used to describe natural phenomena, organisms and anatomy. This paper presents a Model-Image Registration framework that can be used to evaluate models of anatomical shape. An optimisation process is applied to the model [...]

Tetrahedral mesh generation for medical imaging
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Fedorov A., Chrisochoides N., Kikinis R., Warfield S.
We describe the open source implementation of an adaptive tetrahedral mesh generator particularly targeted for non-rigid FEM registration of MR images. While many medical imaging applications require robust mesh generation, there are few codes available. [...]

Cumulative Gaussian Curve Fitter for Boundary Parameterization
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Wang D., Tamburo R., Stetten G.
We have previously developed an algorithm for locating boundaries in an image with sub-pixel resolution, as well as estimating boundary width and image intensity within the adjoining objects. The algorithm operates by finding the parameters of a cumulative [...]

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Journals
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Publication of the Month
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Non-rigid Groupwise Registration using B-Spline Deformation Model
by Balci S.K., Golland P., Wells W.M.

Issues Accepting Submissions
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2010 January-June
141 days
2010 January - December Submissions
325 days
Medical Imaging and Computing
7129 days
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Most Recent Reviews
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LookAt Transform Review
LookAt Transform Initializer and...
by Navneeth Subramanian on 2009-10-13 07:57:54
Worth trying on our data
Local Shape Analysis using MANCOVA
by Donna Dierker on 2009-10-26 11:11:28
supplied source code won't compile,...
DicomImport
by Kent Williams on 2009-10-21 12:41:21
Simple graph cuts are not demonstrated.
Graph Cuts, Caveat Utilitor, and...
by David Doria on 2009-09-14 09:45:34
A useful tool for brain MRI analysis
BRAINSFit: Mutual Information...
by Andriy Fedorov on 2009-07-31 09:11:47
Nice practical contribution requiring...
...
by Tom Vercauteren on 2009-07-24 07:45:57
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