The Insight Journal is an Open Access on-line publication covering the domain of medical image processing and visualization.

The unique characteristics of the Insight Journal include:

- Open-access to articles, data, code, and reviews
- Open peer-review that invites discussion between reviewers and authors
- Emphasis on reproducible science via automated code compilation and testing
- Support for continuous revision of articles, code, and reviews


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vtkINRIA3D: A VTK Extension for Spatiotemporal Data Synchronization, Visualization and Management
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Toussaint N., Sermesant M., Fillard P.
This paper presents an extension of the Visualization ToolKit dedicated to spatiotemporal data synchronization, visualization and management. It basically consists in a versatile library providing functionalities to help developers setting up sophisticated [...]

SharpImage: An Image Processing Prototyping Environment
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Mueller D.
This paper describes an image processing prototyping environment called SharpImage. SharpImage is a stand-alone Windows application geared towards the pre-processing and creation of volume illustrations, although other generic tasks are inherently supported. [...]

Tagged Volume Rendering of the Heart: A Case Study
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Mueller D.
This is a companion paper describing the process and parameters for tagged volume rendering of the heart. We firstly review the relevant concepts and consider the problem of visualising the coronary arteries from computed tomography angiography (CTA) images. [...]

Multidimensional Arrays and the nArray Package
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Sadowsky O., Li D., Deguet A., Kazanzides P.
At the Johns Hopkins University’s Engineering Research Center for Computer-Integrated Surgical Systems and Technology (ERC-CISST) laboratory, we have designed and developed a platformindependent C++ software package, called the nArray library, that provides [...]

Radial Thickness Calculation and Visualization for Volumetric Layers
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WANG D., SHI L., HENG P.A.
Volumetric layers often encountered in medical image analysis are characterized by double and nested bounding surfaces. The thickness of a volumetric layer at a point on the bounding surface is the distance from that point to the opposite surface. There exist [...]

An open, clinically-validated database of 3D+t cine-MR images of the left ventricle with associated manual and automated segmentation
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Najman L., Cousty J., Couprie M., Talbot H., Clément-Guinaudeau S., Goissen T., Garot J.
In this paper, we describe a database of cine-MR (3D+t) images of the left ventricle. This database contains the voxel data, one automated and two manual segmentations for each sequence of images. The segmentations are validated from a clinical point of [...]

Fast BlockMatching Registration with Entropy-based Similarity
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Suarez-Santana E., Nebot R., Westin C., Ruiz-Alzola J.
This paper describes the implementation of a multidimensional block-matching nonrigid registration algorithm. The main features of the algorithm are its simplicity, its free form nature, the modularity of the similarity measure, which makes it possible [...]

Diffeomorphic Demons Using ITK's Finite Difference Solver Hierarchy
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Vercauteren T., Pennec X., Perchant A., Ayache N.
This article provides an implementation of our non-parametric diffeomorphic image registration algorithm generalizing Thirion's demons algorithm. Within the Insight Toolkit (ITK), the demons algorithm is implemented as part of the finite difference solver [...]

ComposeRGBA
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Mueller D.
This article presents the itk::ComposeRGBAImageFilter.

Non-negative matrix factorization framework for dimensionality reduction and unsupervised clustering
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Pathak S.H.D.L.C.H.M.
Non-negative Matrix Factorization (NMF) is a robust approach to learning spatially localized parts-based subspace patterns in applications such as document analysis, image interpretation, and gene expression analysis. NMF-based decomposition capabilities are [...]

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Journals
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Publication of the Month
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A simple Qt based comparison program for ITK and VTK images.
by Perrot-Audet A., Mosaliganti K., Gelas A., Rannou N., Souhait L., Megason S.

Issues Accepting Submissions
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2010 July-December
120 days
2010 January - December Submissions
120 days
Medical Imaging and Computing
6924 days
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Most Recent Reviews
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This implementation is surprisingly...
A Fast Approximation to the Bilateral...
by Oleksandr Dzyubak on 2010-08-18 15:52:25
Much needed contribution
Introducing Dice, Jaccard, and Other...
by Dan Mueller on 2010-07-12 12:15:46
Very useful contribution
A Streaming IO Base Class and Support...
by Luis Ibanez on 2010-06-10 15:03:44
A good candidate for introduction in...
Implementation of a 3D thinning...
by Anonymous on 2010-04-28 03:39:43
Accurate and fast skeletonizer
Implementation of a 3D thinning...
by Oleksandr Dzyubak on 2010-05-03 12:18:31
Excellent addition
Boolean Operations on Surfaces for VTK
by David Doria on 2010-04-30 09:59:58
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