Spherical Demons Registration of Spherical Surfaces
logo

Please use this identifier to cite or link to this publication: http://hdl.handle.net/10380/3117
As demonstrated by the example videos accompanying this submission of the
multiresolution implementation of Spherical Demons, the registration appears
reasonable. However, we are still unable to replicate the warps from the
stable and well verified implementation of this algorithm
url{http://sites.google.com/site/yeoyeo02/software/sphericaldemonsrelease}.

We find the average warp discrepancies between the original implementation and ITK
implementation to be about 5.3 mm on a sphere of radius 100.0 mm (note that
we do not expect a 100% agreement because of implementation differences, but
5.3 mm is relatively large). The submission also includes cortical surface
meshes of 39 subjects and the corresponding segmentation labels of the cortical
surfaces. Ultimately, the best validation would be to compare the overlap of
these segmentation labels after registration. We welcome fellow ITK developers
to work on this.

Please note that this ITK implementation of the algorithm is
currently being reviewed and tested in the NAMIC Sandbox at:
url{http://svn.na-mic.org/NAMICSandBox/trunk/QuadEdgeMeshSphericalDiffeomorphicDemonsRegistration/}.


If you want access to the stable and well verified implementation of this
algorithm, please use the MATLAB code available at:
url{http://sites.google.com/site/yeoyeo02/software/sphericaldemonsrelease}.


This document describes a contribution to the Insight Toolkit intended to support the process of performing deformable registration on two Meshes. The method implemented here is restricted to Meshes with a Spherical geometry and topology, and with scalar values associated to their nodes. The code described here is an implementation of the paper “Spherical Demons: Fast Diffeomorphic Landmark-Free Surface Registration” by Yeo, Sabuncu, Vercauteren, Ayache, Fischl and Golland [3, 4].

This paper is accompanied with the source code, input data, parameters and output data that we used for validating the algorithm described in this paper. This adheres to the fundamental principle that scientific publications must facilitate reproducibility of the reported results.
Data
minus 6 Datasets (3Mb)
Code
minus Automatic Testing Results by Insight-Journal Dashboard on Tue May 18 13:25:03 2010 for revision #4
starstarstarstarstar expertise: 5 sensitivity: 5
yellow CMake was unable to configure this project.
Click here for more details.

Go here to access the main testing dashboard.
plus Automatic Testing Results by Insight-Journal Dashboard on Thu Apr 15 11:01:06 2010 for revision #3
starstarstarstarstar expertise: 5 sensitivity: 5
plus Automatic Testing Results by Insight-Journal Dashboard on Tue Aug 4 10:15:09 2009 for revision #1
starstarstarstarstar expertise: 5 sensitivity: 5

Reviews
There is no review at this time. Be the first to review this publication!

Quick Comments


Resources
backyellow
Download All
Download Paper , View Paper
Download Source code
Github

Statistics more
backyellow
Global rating: starstarstarstarstar
Review rating: starstarstarstarstar [review]
Code rating: starstarstarstarstar
Paper Quality: plus minus

Information more
backyellow
Categories: Deformable registration, Mesh
Keywords: Demons Registration, Landmark-Free, Diffeomorphic, QuadEdgeMesh
Toolkits: ITK, CMake, VTK
Export citation:

Share
backyellow
Share

Linked Publications more
backyellow
Diffeomorphic Demons Using ITK's Finite Difference Solver Hierarchy Diffeomorphic Demons Using ITK's Finite Difference Solver Hierarchy
by Vercauteren T., Pennec X., Perchant A., Ayache N.
Reader/Writer for Analyze Object Maps for ITK Reader/Writer for Analyze Object Maps for ITK
by Hawley J., Johnson H.

View license
Loading license...

Send a message to the author
main_flat
ISSN 2327-770X
Powered by Midas